mountain view ca cat (TaKaRa)
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mountain view ca cat
Mountain View Ca Cat, supplied by TaKaRa, used in various techniques. Bioz Stars score: 96/100, based on 341 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/mountain+view+ca+cat/SMART-Seq+Stranded+Kit/10__7554_slash_elife__109248__2-275-70-67
Average 96 stars, based on 341 article reviews
Mountain View Ca Cat, supplied by TaKaRa, used in various techniques. Bioz Stars score: 96/100, based on 341 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/mountain+view+ca+cat/SMART-Seq+Stranded+Kit/10__7554_slash_elife__109248__2-275-70-67
Average 96 stars, based on 341 article reviews
mountain view ca cat - by Bioz Stars,
2026-10
96/100 stars
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Software:Article Title: SETDB1 enables development beyond cleavage stages by extinguishing the MERVL-driven two-cell totipotency transcriptional program in the mouse embryo Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Gene (Mus musculus) Setdb1 NCBI Gene: 84505 Genetic reagent (M. musculus) Setdb1tm1a(EUCOMM)Wtsi European Mouse Mutant Archive EMMA ID EM:04814 Skarnes et al., 2011 Genetic reagent (M. musculus) B6.Cg- Tg(Pgk1- flpo)10Sykr/J The Jackson Laboratory RRID:IMSR_JAX:011065 Wu et al., 2009 Genetic reagent (M. musculus) C57BL/6- Tg(Zp3- cre)93Knw/J The Jackson Laboratory RRID:IMSR_JAX:003651 de Vries et al., 2000 Software, algorithm StringTie2 https://github.com/skovaka/ stringtie2 RRID:SCR_016338 Kovaka et al., 2019 Software, algorithm Trim Galore (v0.60) https://github.com/FelixKrueger/ TrimGalore RRID:SCR_011847 Krueger, 2025 Martin, 2011 Software, algorithm edgeR (v4.4.1) https://bioconductor.org/packages/ edgeR/ RRID:SCR_012802 Chen et al., 2016; McCarthy et al., 2012; Robinson et al., 2010 Software, algorithm ClusterProfiler (v4.14.4) https://bioconductor.org/packages/ clusterProfiler/ RRID:SCR_016884 Wu et al., 2021 Software, algorithm STAR (v2.7.8) https://github.com/alexdobin/STAR RRID:SCR_004463 Dobin et al., 2013 Software, algorithm Samtools (v1.17) https://github.com/samtools/ samtools/ RRID:SCR_002105 Li et al., 2009 Software, algorithm FeatureCounts (Subread v2.0.0) https://subread.sourceforge.net/ featureCounts.html RRID:SCR_012919 Liao et al., 2014 Software, algorithm DESeq2 (v1.46.0) https://github.com/thelovelab/ DESeq2 RRID:SCR_000154 Love et al., 2014 Software, algorithm BWA (v0.7.1) https://github.com/lh3/bwa RRID:SCR_010910 Li and Durbin, 2009 Software, algorithm deepTools2 v3.5.2 https://github.com/deeptools/ deepTools RRID:SCR_016366 Ramírez et al., 2016 Software, algorithm ggplot2 https://ggplot2.tidyverse.org RRID:SCR_014601 Wickham, 2016 Zeng, Fu et al. eLife 2026;15:RP109248. .. DOI: https://doi.org/10.7554/eLife.109248 15 of 21 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Software, algorithm ComplexHeatmap (R) https://jokergoo.github.io/ ComplexHeatmap-reference/book/ RRID:SCR_017270 Gu et al., 2016 Software, algorithm ggvenn (v0.1.10) https://github.com/yanlinlin82/ ggvenn RRID:SCR_025300 Yan, 2023 Software, algorithm TEtranscripts (v2.2.3) https://github.com/mhammelllaboratory/TEtranscripts RRID:SCR_015687 Jin et al., 2015 Chemical compound, drug CARD HyperOva Cosmo Bio Cat. No. KYD- 010- EX Commercial assay or kit SMART- Seq Stranded Kit Takara Biosciences USA, Recombinant:Article Title: SETDB1 enables development beyond cleavage stages by extinguishing the MERVL-driven two-cell totipotency transcriptional program in the mouse embryo Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Gene (Mus musculus) Setdb1 NCBI Gene: 84505 Genetic reagent (M. musculus) Setdb1tm1a(EUCOMM)Wtsi European Mouse Mutant Archive EMMA ID EM:04814 Skarnes et al., 2011 Genetic reagent (M. musculus) B6.Cg- Tg(Pgk1- flpo)10Sykr/J The Jackson Laboratory RRID:IMSR_JAX:011065 Wu et al., 2009 Genetic reagent (M. musculus) C57BL/6- Tg(Zp3- cre)93Knw/J The Jackson Laboratory RRID:IMSR_JAX:003651 de Vries et al., 2000 Software, algorithm StringTie2 https://github.com/skovaka/ stringtie2 RRID:SCR_016338 Kovaka et al., 2019 Software, algorithm Trim Galore (v0.60) https://github.com/FelixKrueger/ TrimGalore RRID:SCR_011847 Krueger, 2025 Martin, 2011 Software, algorithm edgeR (v4.4.1) https://bioconductor.org/packages/ edgeR/ RRID:SCR_012802 Chen et al., 2016; McCarthy et al., 2012; Robinson et al., 2010 Software, algorithm ClusterProfiler (v4.14.4) https://bioconductor.org/packages/ clusterProfiler/ RRID:SCR_016884 Wu et al., 2021 Software, algorithm STAR (v2.7.8) https://github.com/alexdobin/STAR RRID:SCR_004463 Dobin et al., 2013 Software, algorithm Samtools (v1.17) https://github.com/samtools/ samtools/ RRID:SCR_002105 Li et al., 2009 Software, algorithm FeatureCounts (Subread v2.0.0) https://subread.sourceforge.net/ featureCounts.html RRID:SCR_012919 Liao et al., 2014 Software, algorithm DESeq2 (v1.46.0) https://github.com/thelovelab/ DESeq2 RRID:SCR_000154 Love et al., 2014 Software, algorithm BWA (v0.7.1) https://github.com/lh3/bwa RRID:SCR_010910 Li and Durbin, 2009 Software, algorithm deepTools2 v3.5.2 https://github.com/deeptools/ deepTools RRID:SCR_016366 Ramírez et al., 2016 Software, algorithm ggplot2 https://ggplot2.tidyverse.org RRID:SCR_014601 Wickham, 2016 Zeng, Fu et al. eLife 2026;15:RP109248. .. 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No. KYD- 010- EX Commercial assay or kit SMART- Seq Stranded Kit Takara Biosciences USA, Library Quantification:Article Title: SETDB1 enables development beyond cleavage stages by extinguishing the MERVL-driven two-cell totipotency transcriptional program in the mouse embryo Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Gene (Mus musculus) Setdb1 NCBI Gene: 84505 Genetic reagent (M. musculus) Setdb1tm1a(EUCOMM)Wtsi European Mouse Mutant Archive EMMA ID EM:04814 Skarnes et al., 2011 Genetic reagent (M. musculus) B6.Cg- Tg(Pgk1- flpo)10Sykr/J The Jackson Laboratory RRID:IMSR_JAX:011065 Wu et al., 2009 Genetic reagent (M. musculus) C57BL/6- Tg(Zp3- cre)93Knw/J The Jackson Laboratory RRID:IMSR_JAX:003651 de Vries et al., 2000 Software, algorithm StringTie2 https://github.com/skovaka/ stringtie2 RRID:SCR_016338 Kovaka et al., 2019 Software, algorithm Trim Galore (v0.60) https://github.com/FelixKrueger/ TrimGalore RRID:SCR_011847 Krueger, 2025 Martin, 2011 Software, algorithm edgeR (v4.4.1) https://bioconductor.org/packages/ edgeR/ RRID:SCR_012802 Chen et al., 2016; McCarthy et al., 2012; Robinson et al., 2010 Software, algorithm ClusterProfiler (v4.14.4) https://bioconductor.org/packages/ clusterProfiler/ RRID:SCR_016884 Wu et al., 2021 Software, algorithm STAR (v2.7.8) https://github.com/alexdobin/STAR RRID:SCR_004463 Dobin et al., 2013 Software, algorithm Samtools (v1.17) https://github.com/samtools/ samtools/ RRID:SCR_002105 Li et al., 2009 Software, algorithm FeatureCounts (Subread v2.0.0) https://subread.sourceforge.net/ featureCounts.html RRID:SCR_012919 Liao et al., 2014 Software, algorithm DESeq2 (v1.46.0) https://github.com/thelovelab/ DESeq2 RRID:SCR_000154 Love et al., 2014 Software, algorithm BWA (v0.7.1) https://github.com/lh3/bwa RRID:SCR_010910 Li and Durbin, 2009 Software, algorithm deepTools2 v3.5.2 https://github.com/deeptools/ deepTools RRID:SCR_016366 Ramírez et al., 2016 Software, algorithm ggplot2 https://ggplot2.tidyverse.org RRID:SCR_014601 Wickham, 2016 Zeng, Fu et al. eLife 2026;15:RP109248. .. DOI: https://doi.org/10.7554/eLife.109248 15 of 21 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Software, algorithm ComplexHeatmap (R) https://jokergoo.github.io/ ComplexHeatmap-reference/book/ RRID:SCR_017270 Gu et al., 2016 Software, algorithm ggvenn (v0.1.10) https://github.com/yanlinlin82/ ggvenn RRID:SCR_025300 Yan, 2023 Software, algorithm TEtranscripts (v2.2.3) https://github.com/mhammelllaboratory/TEtranscripts RRID:SCR_015687 Jin et al., 2015 Chemical compound, drug CARD HyperOva Cosmo Bio Cat. No. KYD- 010- EX Commercial assay or kit SMART- Seq Stranded Kit Takara Biosciences USA, Real-time Polymerase Chain Reaction:Article Title: SETDB1 enables development beyond cleavage stages by extinguishing the MERVL-driven two-cell totipotency transcriptional program in the mouse embryo Article Snippet: Reagent type (species) or resource Designation Source or reference Identifiers Additional information Gene (Mus musculus) Setdb1 NCBI Gene: 84505 Genetic reagent (M. musculus) Setdb1tm1a(EUCOMM)Wtsi European Mouse Mutant Archive EMMA ID EM:04814 Skarnes et al., 2011 Genetic reagent (M. musculus) B6.Cg- Tg(Pgk1- flpo)10Sykr/J The Jackson Laboratory RRID:IMSR_JAX:011065 Wu et al., 2009 Genetic reagent (M. musculus) C57BL/6- Tg(Zp3- cre)93Knw/J The Jackson Laboratory RRID:IMSR_JAX:003651 de Vries et al., 2000 Software, algorithm StringTie2 https://github.com/skovaka/ stringtie2 RRID:SCR_016338 Kovaka et al., 2019 Software, algorithm Trim Galore (v0.60) https://github.com/FelixKrueger/ TrimGalore RRID:SCR_011847 Krueger, 2025 Martin, 2011 Software, algorithm edgeR (v4.4.1) https://bioconductor.org/packages/ edgeR/ RRID:SCR_012802 Chen et al., 2016; McCarthy et al., 2012; Robinson et al., 2010 Software, algorithm ClusterProfiler (v4.14.4) https://bioconductor.org/packages/ clusterProfiler/ RRID:SCR_016884 Wu et al., 2021 Software, algorithm STAR (v2.7.8) https://github.com/alexdobin/STAR RRID:SCR_004463 Dobin et al., 2013 Software, algorithm Samtools (v1.17) https://github.com/samtools/ samtools/ RRID:SCR_002105 Li et al., 2009 Software, algorithm FeatureCounts (Subread v2.0.0) https://subread.sourceforge.net/ featureCounts.html RRID:SCR_012919 Liao et al., 2014 Software, algorithm DESeq2 (v1.46.0) https://github.com/thelovelab/ DESeq2 RRID:SCR_000154 Love et al., 2014 Software, algorithm BWA (v0.7.1) https://github.com/lh3/bwa RRID:SCR_010910 Li and Durbin, 2009 Software, algorithm deepTools2 v3.5.2 https://github.com/deeptools/ deepTools RRID:SCR_016366 Ramírez et al., 2016 Software, algorithm ggplot2 https://ggplot2.tidyverse.org RRID:SCR_014601 Wickham, 2016 Zeng, Fu et al. eLife 2026;15:RP109248. .. DOI: https://doi.org/10.7554/eLife.109248 15 of 21 Reagent type (species) or resource Designation Source or reference Identifiers Additional information Software, algorithm ComplexHeatmap (R) https://jokergoo.github.io/ ComplexHeatmap-reference/book/ RRID:SCR_017270 Gu et al., 2016 Software, algorithm ggvenn (v0.1.10) https://github.com/yanlinlin82/ ggvenn RRID:SCR_025300 Yan, 2023 Software, algorithm TEtranscripts (v2.2.3) https://github.com/mhammelllaboratory/TEtranscripts RRID:SCR_015687 Jin et al., 2015 Chemical compound, drug CARD HyperOva Cosmo Bio Cat. No. KYD- 010- EX Commercial assay or kit SMART- Seq Stranded Kit Takara Biosciences USA, |